STRINGSTRING
TriadP54344 protein (Trichoplax adhaerens) - STRING interaction network
"TriadP54344" - Putative uncharacterized protein in Trichoplax adhaerens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TriadP54344Putative uncharacterized protein (408 aa)    
Predicted Functional Partners:
TriadP5178
Putative uncharacterized protein (308 aa)
         
  0.775
TriadP50243
Putative uncharacterized protein (337 aa)
       
  0.718
TriadP57566
DNA ligase (823 aa)
       
  0.611
TriadP19032
Putative uncharacterized protein (600 aa)
       
  0.606
TriadP25163
Putative uncharacterized protein (1492 aa)
           
  0.562
TriadP59893
Putative uncharacterized protein (390 aa)
         
  0.551
NTH1
Bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase ; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (292 aa)
           
  0.506
TriadP60774
Putative uncharacterized protein (525 aa)
       
  0.492
TriadP28268
Putative uncharacterized protein (342 aa)
       
  0.492
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: Placozoa, T. adhaerens, Trichoplax, Trichoplax adhaerens, placozoan, placozoans
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