STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNAJ_LOCUS3894Uncharacterized protein. (526 aa)    
Predicted Functional Partners:
HNAJ_LOCUS5329
Nuclear pore protein.
   
 0.986
A0A0R3TTK5
Nuclear pore protein.
   
 0.986
HNAJ_LOCUS785
RanBD1 domain-containing protein.
   
 0.985
HNAJ_LOCUS9703
Uncharacterized protein.
   
 0.985
HNAJ_LOCUS9104
Nucleoporin_N domain-containing protein.
   
 0.982
HNAJ_LOCUS8457
Nup54 domain-containing protein.
    
 0.970
HNAJ_LOCUS9188
Uncharacterized protein.
    
 0.947
A0A0R3TVQ5
Uncharacterized protein.
    
 0.939
HNAJ_LOCUS7558
Uncharacterized protein.
   
 0.926
HNAJ_LOCUS304
Uncharacterized protein.
   
 0.925
Your Current Organism:
Rodentolepis nana
NCBI taxonomy Id: 102285
Other names: Hymenolepis nana, R. nana
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