STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAA11216.1Hypothetical protein; Belongs to the UPF0176 family. (281 aa)    
Predicted Functional Partners:
GAA11217.1
Hypothetical protein.
       0.832
GAA11218.1
Hypothetical protein.
       0.701
GAA11219.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.681
GAA11221.1
Hypothetical protein.
       0.658
GAA11220.1
Putative protein kinase; Belongs to the fructosamine kinase family.
       0.617
GAA11214.1
Putative LSR2-like protein.
       0.543
GAA11215.1
Hypothetical protein.
       0.400
Your Current Organism:
Gordonia alkanivorans
NCBI taxonomy Id: 1027371
Other names: G. alkanivorans NBRC 16433, Gordonia alkanivorans CIP 106363, Gordonia alkanivorans DSM 44369, Gordonia alkanivorans NBRC 16433, Gordonia alkanivorans str. NBRC 16433, Gordonia alkanivorans strain NBRC 16433
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.