Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFBM_0660 | SFBM_0826 | SFBM_0660 | SFBM_0826 | Stage IV sporulation protein B. | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.773 |
| SFBM_0660 | SFBM_0944 | SFBM_0660 | SFBM_0944 | Stage IV sporulation protein B. | Stage II sporulation protein P. | 0.853 |
| SFBM_0660 | SFBM_0949 | SFBM_0660 | SFBM_0949 | Stage IV sporulation protein B. | Stage V sporulation protein AE. | 0.774 |
| SFBM_0660 | SFBM_0950 | SFBM_0660 | SFBM_0950 | Stage IV sporulation protein B. | Stage V sporulation protein AD. | 0.784 |
| SFBM_0660 | SFBM_0951 | SFBM_0660 | SFBM_0951 | Stage IV sporulation protein B. | Stage V sporulation protein AC. | 0.775 |
| SFBM_0660 | gerA | SFBM_0660 | SFBM_1291 | Stage IV sporulation protein B. | Spore germination protein GerAA. | 0.774 |
| SFBM_0660 | gpr | SFBM_0660 | SFBM_0945 | Stage IV sporulation protein B. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.808 |
| SFBM_0660 | spoIIAB | SFBM_0660 | SFBM_1018 | Stage IV sporulation protein B. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.811 |
| SFBM_0660 | spoIIID | SFBM_0660 | SFBM_1272 | Stage IV sporulation protein B. | Sporulation transcriptional regulator SpoIIID. | 0.799 |
| SFBM_0660 | spoIVA | SFBM_0660 | SFBM_0809 | Stage IV sporulation protein B. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.805 |
| SFBM_0826 | SFBM_0660 | SFBM_0826 | SFBM_0660 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage IV sporulation protein B. | 0.773 |
| SFBM_0826 | SFBM_0944 | SFBM_0826 | SFBM_0944 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage II sporulation protein P. | 0.762 |
| SFBM_0826 | SFBM_0949 | SFBM_0826 | SFBM_0949 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AE. | 0.770 |
| SFBM_0826 | SFBM_0950 | SFBM_0826 | SFBM_0950 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AD. | 0.771 |
| SFBM_0826 | SFBM_0951 | SFBM_0826 | SFBM_0951 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AC. | 0.771 |
| SFBM_0826 | gerA | SFBM_0826 | SFBM_1291 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore germination protein GerAA. | 0.768 |
| SFBM_0826 | gpr | SFBM_0826 | SFBM_0945 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.765 |
| SFBM_0826 | spoIIAB | SFBM_0826 | SFBM_1018 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.761 |
| SFBM_0826 | spoIIID | SFBM_0826 | SFBM_1272 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sporulation transcriptional regulator SpoIIID. | 0.795 |
| SFBM_0826 | spoIVA | SFBM_0826 | SFBM_0809 | Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.782 |
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