STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049855_02348Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_001049855_02350
Unannotated protein.
 
   
 0.946
GCA_001049855_02349
Unannotated protein.
 
   
 0.921
GCA_001049855_07701
Unannotated protein.
  
     0.728
GCA_001049855_02179
Unannotated protein.
   
  
 0.674
GCA_001049855_02168
Unannotated protein.
      
 0.455
GCA_001049855_01634
Unannotated protein.
   
  
 0.444
GCA_001049855_04898
Unannotated protein.
     
 0.437
Your Current Organism:
Streptomyces sp. Wb2n11
NCBI taxonomy Id: 1030533
Other names: S. sp. Wb2n-11, Streptomyces sp. Wb2n-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.