STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icdNADP(+)-dependent isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (740 aa)    
Predicted Functional Partners:
korA
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
 
 0.990
acnA
Aconitate hydratase; Protein synonym:aconitase.
  
 
 0.966
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.956
gltB
Glutamate synthase large subunit.
     
 0.938
MLP_30780
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.938
korB
2-oxoglutarate ferredoxin oxidoreductase beta subunit.
  
 
 0.937
MLP_43240
7Fe ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
  
 0.839
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
  0.834
gdhA
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.831
gdh
NAD-specific glutamate dehydrogenase.
   
 
 0.820
Your Current Organism:
Microlunatus phosphovorus
NCBI taxonomy Id: 1032480
Other names: M. phosphovorus NM-1, Microlunatus phosphovorus NM-1, Microlunatus phosphovorus str. NM-1, Microlunatus phosphovorus strain NM-1
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