STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLP_23260Hypothetical protein. (359 aa)    
Predicted Functional Partners:
ligC
ATP-dependent DNA ligase LigC.
   
 0.984
ku
DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
 
  
 0.877
lig
ATP-dependent DNA ligase.
   
 0.782
phr
Deoxyribodipyrimidine photo-lyase; Protein synonym:DNA photolyase.
       0.762
MLP_23240
Hypothetical protein.
       0.762
MLP_23250
Hypothetical protein.
       0.762
MLP_23270
Hypothetical protein.
       0.648
MLP_41970
Hypothetical protein.
  
     0.453
MLP_51390
Putative DNA glycosylase; Belongs to the FPG family.
 
     0.431
MLP_33180
Hypothetical protein.
 
   
 0.422
Your Current Organism:
Microlunatus phosphovorus
NCBI taxonomy Id: 1032480
Other names: M. phosphovorus NM-1, Microlunatus phosphovorus NM-1, Microlunatus phosphovorus str. NM-1, Microlunatus phosphovorus strain NM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.