STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_11477Serine/threonine-protein kinase Doa. (617 aa)    
Predicted Functional Partners:
G5I_12048
Serine/threonine-protein kinase SRPK1.
    
 
0.676
G5I_12371
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.641
G5I_04528
Putative splicing factor, arginine/serine-rich 7.
   
 
 0.562
G5I_11478
Progestin and adipoQ receptor family member 4.
      
 0.526
G5I_03948
Splicing factor, arginine/serine-rich 1.
    
 
 0.483
G5I_00547
E3 ubiquitin-protein ligase LRSAM1.
    
 
 0.420
G5I_01657
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.
   
  
 0.420
G5I_10206
Splicing factor, arginine/serine-rich 2.
    
 
 0.419
G5I_02536
DNA polymerase.
      
 0.407
G5I_00985
tRNA selenocysteine 1-associated protein 1.
   
 
 0.404
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.