STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WANG_0408Oligopeptide ABC transporter protein. (309 aa)    
Predicted Functional Partners:
WANG_0405
Oligopeptide ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.999
oppF
ABC superfamily ATP binding cassette transporter ABC protein; Belongs to the ABC transporter superfamily.
 
 0.999
WANG_0407
Oligopeptide transport protein.
 
 0.998
WANG_0663
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.988
oppD
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
  
 0.988
WANG_1826
ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 0.985
WANG_1823
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
  
 0.948
WANG_1668
ABC amino acid transporter ATP-binding protein.
    
 0.806
glnQ-2
Glutamine ABC transporter ATP binding protein.
    
 0.717
metN
ABC superfamily ATP binding cassette transporter, binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    0.673
Your Current Organism:
Lactobacillus kefiranofaciens
NCBI taxonomy Id: 1033837
Other names: L. kefiranofaciens ZW3, Lactobacillus kefiranofaciens ZW3, Lactobacillus kefiranofaciens str. ZW3, Lactobacillus kefiranofaciens strain ZW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.