STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsKFtsK/SpoIIIE family DNA translocase; Belongs to the FtsK/SpoIIIE/SftA family. (806 aa)    
Predicted Functional Partners:
WANG_0989
Zn-dependent peptidase.
  
    0.876
WANG_0988
Protease.
  
    0.874
WANG_0987
Possible 3-oxoacyl-[acyl-carrier-protein] reductase.
       0.873
cspR
Possible tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.861
WANG_0991
Hypothetical protein.
       0.807
WANG_0986
Hypothetical protein.
     
 0.729
WANG_1364
Chromosome partitioning protein; Belongs to the ParB family.
 
  
 0.706
WANG_0842
Penicillin-binding protein 1.
 
 
 0.702
parB
Chromosome partitioning protein; Belongs to the ParB family.
 
  
 0.701
WANG_0993
Hypothetical protein.
 
     0.690
Your Current Organism:
Lactobacillus kefiranofaciens
NCBI taxonomy Id: 1033837
Other names: L. kefiranofaciens ZW3, Lactobacillus kefiranofaciens ZW3, Lactobacillus kefiranofaciens str. ZW3, Lactobacillus kefiranofaciens strain ZW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.