Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCB69544.1 | speA | FBFL15_1479 | FBFL15_1604 | Protein of unknown function. | Arginine decarboxylase. | 0.475 |
CCB69666.1 | CCB69667.1 | FBFL15_1602 | FBFL15_1603 | 5.2 Protein of unknown function similar to proteins from other organisms. | Protein of unknown function. | 0.726 |
CCB69666.1 | speA | FBFL15_1602 | FBFL15_1604 | 5.2 Protein of unknown function similar to proteins from other organisms. | Arginine decarboxylase. | 0.668 |
CCB69667.1 | CCB69666.1 | FBFL15_1603 | FBFL15_1602 | Protein of unknown function. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.726 |
CCB69667.1 | speA | FBFL15_1603 | FBFL15_1604 | Protein of unknown function. | Arginine decarboxylase. | 0.900 |
CCB69667.1 | speD | FBFL15_1603 | FBFL15_0534 | Protein of unknown function. | Adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.454 |
CCB70624.1 | argH | FBFL15_2627 | FBFL15_2072 | Arginase/agmatinase/formiminoglutamase family protein; Belongs to the arginase family. | Argininosuccinate lyase; Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. | 0.814 |
CCB70624.1 | speA | FBFL15_2627 | FBFL15_1604 | Arginase/agmatinase/formiminoglutamase family protein; Belongs to the arginase family. | Arginine decarboxylase. | 0.945 |
CCB70624.1 | speD | FBFL15_2627 | FBFL15_0534 | Arginase/agmatinase/formiminoglutamase family protein; Belongs to the arginase family. | Adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.522 |
argH | CCB70624.1 | FBFL15_2072 | FBFL15_2627 | Argininosuccinate lyase; Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. | Arginase/agmatinase/formiminoglutamase family protein; Belongs to the arginase family. | 0.814 |
argH | lysA | FBFL15_2072 | FBFL15_2185 | Argininosuccinate lyase; Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.482 |
argH | speA | FBFL15_2072 | FBFL15_1604 | Argininosuccinate lyase; Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. | Arginine decarboxylase. | 0.833 |
lysA | argH | FBFL15_2185 | FBFL15_2072 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Argininosuccinate lyase; Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. | 0.482 |
lysA | speA | FBFL15_2185 | FBFL15_1604 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Arginine decarboxylase. | 0.572 |
lysA | speD | FBFL15_2185 | FBFL15_0534 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.580 |
murA | speA | FBFL15_2537 | FBFL15_1604 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | Arginine decarboxylase. | 0.421 |
speA | CCB69544.1 | FBFL15_1604 | FBFL15_1479 | Arginine decarboxylase. | Protein of unknown function. | 0.475 |
speA | CCB69666.1 | FBFL15_1604 | FBFL15_1602 | Arginine decarboxylase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.668 |
speA | CCB69667.1 | FBFL15_1604 | FBFL15_1603 | Arginine decarboxylase. | Protein of unknown function. | 0.900 |
speA | CCB70624.1 | FBFL15_1604 | FBFL15_2627 | Arginine decarboxylase. | Arginase/agmatinase/formiminoglutamase family protein; Belongs to the arginase family. | 0.945 |
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