STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60870.1COG3333 Uncharacterized protein conserved in bacteria. (485 aa)    
Predicted Functional Partners:
AFK64207.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.854
AFK61948.1
TctC; COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.853
AFK60777.1
Periplasmic binding protein; COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.852
AFK61188.1
COG3181 Uncharacterized protein conserved in bacteria.
  
 0.852
AFK64603.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.852
AFK60971.1
TctC; COG3181 Uncharacterized protein conserved in bacteria.
  
 0.851
AFK64257.1
Extra-cytoplasmic solute receptor family protein 10; COG3181 Uncharacterized protein conserved in bacteria.
  
 0.851
AFK60766.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.850
AFK63219.1
COG3181 Uncharacterized protein conserved in bacteria.
  
 0.850
AFK63773.1
COG3181 Uncharacterized protein conserved in bacteria.
  
 0.850
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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