Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0659 | all0661 | gene:10492670 | gene:10492672 | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; ORF_ID:all0659; probable transcription regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.664 |
all0659 | asl0660 | gene:10492670 | gene:10492671 | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; ORF_ID:all0659; probable transcription regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | ORF_ID:asl0660; unknown protein. | 0.773 |
all0661 | all0659 | gene:10492672 | gene:10492670 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; ORF_ID:all0659; probable transcription regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.664 |
all0661 | all1035 | gene:10492672 | gene:10493049 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | Transcriptional regulator; ORF_ID:all1035. | 0.733 |
all0661 | all4096 | gene:10492672 | gene:10496144 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | Two-component hybrid sensor and regulator; ORF_ID:all4096. | 0.863 |
all0661 | alr2278 | gene:10492672 | gene:10494307 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | ORF_ID:alr2278; similar to soluble guanylyl cyclase beta subunit. | 0.920 |
all0661 | alr2307 | gene:10492672 | gene:10494336 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | Two-component hybrid sensor and regulator; ORF_ID:alr2307. | 0.556 |
all0661 | alr2325 | gene:10492672 | gene:10494354 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | Transcriptional regulator; ORF_ID:alr2325. | 0.710 |
all0661 | alr3017 | gene:10492672 | gene:10495053 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | ORF_ID:alr3017; hypothetical protein. | 0.583 |
all0661 | alr3121 | gene:10492672 | gene:10495158 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | Two-component hybrid sensor and regulator; ORF_ID:alr3121. | 0.600 |
all0661 | alr5251 | gene:10492672 | gene:10497310 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | Two-component response regulator; ORF_ID:alr5251. | 0.643 |
all0661 | asl0660 | gene:10492672 | gene:10492671 | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | ORF_ID:asl0660; unknown protein. | 0.664 |
all1035 | all0661 | gene:10493049 | gene:10492672 | Transcriptional regulator; ORF_ID:all1035. | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.733 |
all4096 | all0661 | gene:10496144 | gene:10492672 | Two-component hybrid sensor and regulator; ORF_ID:all4096. | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.863 |
all4096 | alr2307 | gene:10496144 | gene:10494336 | Two-component hybrid sensor and regulator; ORF_ID:all4096. | Two-component hybrid sensor and regulator; ORF_ID:alr2307. | 0.413 |
all4096 | alr3121 | gene:10496144 | gene:10495158 | Two-component hybrid sensor and regulator; ORF_ID:all4096. | Two-component hybrid sensor and regulator; ORF_ID:alr3121. | 0.545 |
alr2278 | all0661 | gene:10494307 | gene:10492672 | ORF_ID:alr2278; similar to soluble guanylyl cyclase beta subunit. | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.920 |
alr2278 | alr3017 | gene:10494307 | gene:10495053 | ORF_ID:alr2278; similar to soluble guanylyl cyclase beta subunit. | ORF_ID:alr3017; hypothetical protein. | 0.403 |
alr2307 | all0661 | gene:10494336 | gene:10492672 | Two-component hybrid sensor and regulator; ORF_ID:alr2307. | Adenylate cyclase; ORF_ID:all0661; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.556 |
alr2307 | all4096 | gene:10494336 | gene:10496144 | Two-component hybrid sensor and regulator; ORF_ID:alr2307. | Two-component hybrid sensor and regulator; ORF_ID:all4096. | 0.413 |
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