Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0729 | all0926 | gene:10492739 | gene:10492939 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all0926. | 0.974 |
all0729 | all1068 | gene:10492739 | gene:10493082 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all1068. | 0.975 |
all0729 | all1069 | gene:10492739 | gene:10493083 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Methyl-accepting chemotaxis protein; ORF_ID:all1069. | 0.972 |
all0729 | all1070 | gene:10492739 | gene:10493084 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Purine-binding chemotaxis protein; ORF_ID:all1070; cheW gene product. | 0.696 |
all0729 | all1072 | gene:10492739 | gene:10493086 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component response regulator; Controls heterocyst pattern formation. | 0.895 |
all0729 | all1716 | gene:10492739 | gene:10493734 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.992 |
all0729 | all2161 | gene:10492739 | gene:10494190 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all2161. | 0.974 |
all0729 | all4097 | gene:10492739 | gene:10496145 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all4097. | 0.983 |
all0729 | alr2428 | gene:10492739 | gene:10494458 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:alr2428. | 0.989 |
all0729 | cyaC | gene:10492739 | gene:10497018 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Adenylate cyclase carring two-component hybrid sensor and regulator domains; ORF_ID:all4963. | 0.983 |
all0926 | all0729 | gene:10492939 | gene:10492739 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Two-component hybrid sensor and regulator; ORF_ID:all0729. | 0.974 |
all0926 | all1068 | gene:10492939 | gene:10493082 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Two-component hybrid sensor and regulator; ORF_ID:all1068. | 0.907 |
all0926 | all1069 | gene:10492939 | gene:10493083 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Methyl-accepting chemotaxis protein; ORF_ID:all1069. | 0.996 |
all0926 | all1070 | gene:10492939 | gene:10493084 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Purine-binding chemotaxis protein; ORF_ID:all1070; cheW gene product. | 0.988 |
all0926 | all1072 | gene:10492939 | gene:10493086 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Two-component response regulator; Controls heterocyst pattern formation. | 0.569 |
all0926 | all1716 | gene:10492939 | gene:10493734 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Two-component hybrid sensor and regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
all0926 | all2161 | gene:10492939 | gene:10494190 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Two-component hybrid sensor and regulator; ORF_ID:all2161. | 0.989 |
all0926 | all4097 | gene:10492939 | gene:10496145 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Two-component hybrid sensor and regulator; ORF_ID:all4097. | 0.990 |
all0926 | alr2428 | gene:10492939 | gene:10494458 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Two-component hybrid sensor and regulator; ORF_ID:alr2428. | 0.981 |
all0926 | cyaC | gene:10492939 | gene:10497018 | Two-component hybrid sensor and regulator; ORF_ID:all0926. | Adenylate cyclase carring two-component hybrid sensor and regulator domains; ORF_ID:all4963. | 0.969 |
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