Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0889 | all2334 | gene:10492902 | gene:10494363 | ORF_ID:all0889; hypothetical protein. | Serine/threonine kinase; ORF_ID:all2334. | 0.563 |
all1731 | all2334 | gene:10493749 | gene:10494363 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:all2334. | 0.802 |
all2334 | all0889 | gene:10494363 | gene:10492902 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:all0889; hypothetical protein. | 0.563 |
all2334 | all1731 | gene:10494363 | gene:10493749 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:all1731; hypothetical protein. | 0.802 |
all2334 | all2470 | gene:10494363 | gene:10494501 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:all2470; hypothetical protein. | 0.793 |
all2334 | all4084 | gene:10494363 | gene:10496132 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:all4084; unknown protein. | 0.565 |
all2334 | all5016 | gene:10494363 | gene:10497074 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:all5016; hypothetical protein. | 0.589 |
all2334 | alr0547 | gene:10494363 | gene:10492558 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:alr0547; probable protein phosphatase. | 0.804 |
all2334 | alr1677 | gene:10494363 | gene:10493694 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:alr1677; hypothetical protein. | 0.564 |
all2334 | alr3495 | gene:10494363 | gene:10495534 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:alr3495; hypothetical protein. | 0.545 |
all2334 | alr4516 | gene:10494363 | gene:10496565 | Serine/threonine kinase; ORF_ID:all2334. | ORF_ID:alr4516; probable protein phosphatase. | 0.806 |
all2334 | petE | gene:10494363 | gene:10492266 | Serine/threonine kinase; ORF_ID:all2334. | Plastocyanin precursor; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. | 0.604 |
all2470 | all2334 | gene:10494501 | gene:10494363 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:all2334. | 0.793 |
all4084 | all2334 | gene:10496132 | gene:10494363 | ORF_ID:all4084; unknown protein. | Serine/threonine kinase; ORF_ID:all2334. | 0.565 |
all5016 | all2334 | gene:10497074 | gene:10494363 | ORF_ID:all5016; hypothetical protein. | Serine/threonine kinase; ORF_ID:all2334. | 0.589 |
alr0547 | all2334 | gene:10492558 | gene:10494363 | ORF_ID:alr0547; probable protein phosphatase. | Serine/threonine kinase; ORF_ID:all2334. | 0.804 |
alr1677 | all2334 | gene:10493694 | gene:10494363 | ORF_ID:alr1677; hypothetical protein. | Serine/threonine kinase; ORF_ID:all2334. | 0.564 |
alr3495 | all2334 | gene:10495534 | gene:10494363 | ORF_ID:alr3495; hypothetical protein. | Serine/threonine kinase; ORF_ID:all2334. | 0.545 |
alr4516 | all2334 | gene:10496565 | gene:10494363 | ORF_ID:alr4516; probable protein phosphatase. | Serine/threonine kinase; ORF_ID:all2334. | 0.806 |
petE | all2334 | gene:10492266 | gene:10494363 | Plastocyanin precursor; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. | Serine/threonine kinase; ORF_ID:all2334. | 0.604 |