STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all3169ORF_ID:all3169; WD repeat protein with Ser/Thr protein protein kinase motif. (559 aa)    
Predicted Functional Partners:
alr4954
Serine/threonine kinase; ORF_ID:alr4954.
 
   0.691
all1919
Serine/threonine kinase; ORF_ID:all1919.
 
     0.596
alr4516
ORF_ID:alr4516; probable protein phosphatase.
 
   0.543
cyaD
Adenylate cyclase; ORF_ID:all0743; cyaD gene product.
   
 
 0.528
all3220
ORF_ID:all3220; hypothetical protein.
    
 0.521
all1731
ORF_ID:all1731; hypothetical protein.
   0.513
alr0547
ORF_ID:alr0547; probable protein phosphatase.
 
   0.497
alr2418
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.497
all2470
ORF_ID:all2470; hypothetical protein.
   0.441
all4761
ORF_ID:all4761; unknown protein.
   
 0.434
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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