Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1466 | all3206 | gene:10493480 | gene:10495244 | Kinesin light chain; ORF_ID:all1466. | Serine/threonine kinase; ORF_ID:all3206. | 0.454 |
all1466 | all3207 | gene:10493480 | gene:10495245 | Kinesin light chain; ORF_ID:all1466. | Serine/threonine kinase; ORF_ID:all3207. | 0.608 |
all1466 | all3780 | gene:10493480 | gene:10495822 | Kinesin light chain; ORF_ID:all1466. | ORF_ID:all3780; similar to kinesin light chain. | 0.432 |
all1731 | all3206 | gene:10493749 | gene:10495244 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:all3206. | 0.804 |
all1731 | all3207 | gene:10493749 | gene:10495245 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:all3207. | 0.804 |
all1731 | alr0548 | gene:10493749 | gene:10492559 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr0548. | 0.828 |
all1731 | alr4954 | gene:10493749 | gene:10497009 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4954. | 0.821 |
all2470 | all3206 | gene:10494501 | gene:10495244 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:all3206. | 0.794 |
all2470 | all3207 | gene:10494501 | gene:10495245 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:all3207. | 0.792 |
all2470 | alr0548 | gene:10494501 | gene:10492559 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr0548. | 0.820 |
all2470 | alr4954 | gene:10494501 | gene:10497009 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4954. | 0.815 |
all3206 | all1466 | gene:10495244 | gene:10493480 | Serine/threonine kinase; ORF_ID:all3206. | Kinesin light chain; ORF_ID:all1466. | 0.454 |
all3206 | all1731 | gene:10495244 | gene:10493749 | Serine/threonine kinase; ORF_ID:all3206. | ORF_ID:all1731; hypothetical protein. | 0.804 |
all3206 | all2470 | gene:10495244 | gene:10494501 | Serine/threonine kinase; ORF_ID:all3206. | ORF_ID:all2470; hypothetical protein. | 0.794 |
all3206 | all3207 | gene:10495244 | gene:10495245 | Serine/threonine kinase; ORF_ID:all3206. | Serine/threonine kinase; ORF_ID:all3207. | 0.639 |
all3206 | all3780 | gene:10495244 | gene:10495822 | Serine/threonine kinase; ORF_ID:all3206. | ORF_ID:all3780; similar to kinesin light chain. | 0.566 |
all3206 | alr0547 | gene:10495244 | gene:10492558 | Serine/threonine kinase; ORF_ID:all3206. | ORF_ID:alr0547; probable protein phosphatase. | 0.804 |
all3206 | alr0548 | gene:10495244 | gene:10492559 | Serine/threonine kinase; ORF_ID:all3206. | Serine/threonine kinase; ORF_ID:alr0548. | 0.423 |
all3206 | alr4516 | gene:10495244 | gene:10496565 | Serine/threonine kinase; ORF_ID:all3206. | ORF_ID:alr4516; probable protein phosphatase. | 0.830 |
all3206 | alr4954 | gene:10495244 | gene:10497009 | Serine/threonine kinase; ORF_ID:all3206. | Serine/threonine kinase; ORF_ID:alr4954. | 0.424 |
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