STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srpBSulfur-regulated protein; ORF_ID:all3396; srpB gene product. (106 aa)    
Predicted Functional Partners:
alr4772
ORF_ID:alr4772; hypothetical protein.
  
  
 0.798
all0706
ORF_ID:all0706; probable amidase.
   
    0.645
all1515
ORF_ID:all1515; probable cation-transporting ATPase.
  
 
 0.532
all3245
Cation-transporting ATPase; ORF_ID:all3245.
  
 
 0.532
all3375
Cation-transporting ATPase; ORF_ID:all3375.
  
 
 0.532
alr3723
Cation-transporting P-type ATPase; ORF_ID:alr3723.
  
 
 0.532
alr4808
CinA-like protein; ORF_ID:alr4808; competence-damage inducible protein CinA homolog; Belongs to the CinA family.
  
  
 0.435
all0395
L-2,4-diaminobutyrate decarboxylase; ORF_ID:all0395.
   
  
 0.413
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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