Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0729 | all4304 | gene:10492739 | gene:10496353 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | ORF_ID:all4304; hypothetical protein. | 0.642 |
all0729 | all4897 | gene:10492739 | gene:10496951 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | ORF_ID:all4897; hypothetical protein. | 0.989 |
all0729 | alr3761 | gene:10492739 | gene:10495803 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:alr3761. | 0.984 |
all2509 | all4304 | gene:10494540 | gene:10496353 | ORF_ID:all2509; similar to phosphoenolpyruvate synthase. | ORF_ID:all4304; hypothetical protein. | 0.764 |
all2509 | all4615 | gene:10494540 | gene:10496665 | ORF_ID:all2509; similar to phosphoenolpyruvate synthase. | ORF_ID:all4615; unknown protein. | 0.764 |
all2509 | alr4309 | gene:10494540 | gene:10496358 | ORF_ID:all2509; similar to phosphoenolpyruvate synthase. | ORF_ID:alr4309; hypothetical protein. | 0.746 |
all2509 | alr4611 | gene:10494540 | gene:10496661 | ORF_ID:all2509; similar to phosphoenolpyruvate synthase. | ORF_ID:alr4611; unknown protein. | 0.739 |
all2509 | alr4616 | gene:10494540 | gene:10496666 | ORF_ID:all2509; similar to phosphoenolpyruvate synthase. | ORF_ID:alr4616; similar to ferrochelatase; Belongs to the ferrochelatase family. | 0.769 |
all2509 | asl0822 | gene:10494540 | gene:10492833 | ORF_ID:all2509; similar to phosphoenolpyruvate synthase. | ORF_ID:asl0822; hypothetical protein. | 0.665 |
all4303 | all4304 | gene:10496352 | gene:10496353 | ORF_ID:all4303; hypothetical protein. | ORF_ID:all4304; hypothetical protein. | 0.820 |
all4304 | all0729 | gene:10496353 | gene:10492739 | ORF_ID:all4304; hypothetical protein. | Two-component hybrid sensor and regulator; ORF_ID:all0729. | 0.642 |
all4304 | all2509 | gene:10496353 | gene:10494540 | ORF_ID:all4304; hypothetical protein. | ORF_ID:all2509; similar to phosphoenolpyruvate synthase. | 0.764 |
all4304 | all4303 | gene:10496353 | gene:10496352 | ORF_ID:all4304; hypothetical protein. | ORF_ID:all4303; hypothetical protein. | 0.820 |
all4304 | all4615 | gene:10496353 | gene:10496665 | ORF_ID:all4304; hypothetical protein. | ORF_ID:all4615; unknown protein. | 0.746 |
all4304 | all4897 | gene:10496353 | gene:10496951 | ORF_ID:all4304; hypothetical protein. | ORF_ID:all4897; hypothetical protein. | 0.639 |
all4304 | alr3761 | gene:10496353 | gene:10495803 | ORF_ID:all4304; hypothetical protein. | Two-component hybrid sensor and regulator; ORF_ID:alr3761. | 0.704 |
all4304 | alr4309 | gene:10496353 | gene:10496358 | ORF_ID:all4304; hypothetical protein. | ORF_ID:alr4309; hypothetical protein. | 0.700 |
all4304 | alr4611 | gene:10496353 | gene:10496661 | ORF_ID:all4304; hypothetical protein. | ORF_ID:alr4611; unknown protein. | 0.760 |
all4304 | alr4616 | gene:10496353 | gene:10496666 | ORF_ID:all4304; hypothetical protein. | ORF_ID:alr4616; similar to ferrochelatase; Belongs to the ferrochelatase family. | 0.717 |
all4304 | asl0822 | gene:10496353 | gene:10492833 | ORF_ID:all4304; hypothetical protein. | ORF_ID:asl0822; hypothetical protein. | 0.689 |
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