Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1547 | all4546 | gene:10493560 | gene:10496596 | ATP-binding protein of ABC transporter; ORF_ID:all1547. | ABC transporter ATP-binding protein; ORF_ID:all4546. | 0.849 |
all1547 | alr0296 | gene:10493560 | gene:10492304 | ATP-binding protein of ABC transporter; ORF_ID:all1547. | ORF_ID:alr0296; hypothetical protein. | 0.484 |
all1547 | alr0484 | gene:10493560 | gene:10492493 | ATP-binding protein of ABC transporter; ORF_ID:all1547. | ORF_ID:alr0484; hypothetical protein. | 0.977 |
all1547 | alr4576 | gene:10493560 | gene:10496626 | ATP-binding protein of ABC transporter; ORF_ID:all1547. | Biotin transporter; ORF_ID:alr4576; hypothetical protein. | 0.956 |
all1547 | cbiM | gene:10493560 | gene:10495985 | ATP-binding protein of ABC transporter; ORF_ID:all1547. | Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | 0.551 |
all1547 | cbiM-2 | gene:10493560 | gene:10495989 | ATP-binding protein of ABC transporter; ORF_ID:all1547. | Cobalt transport protein; ORF_ID:alr3947; cbiM gene product. | 0.551 |
all4546 | all1547 | gene:10496596 | gene:10493560 | ABC transporter ATP-binding protein; ORF_ID:all4546. | ATP-binding protein of ABC transporter; ORF_ID:all1547. | 0.849 |
all4546 | alr0296 | gene:10496596 | gene:10492304 | ABC transporter ATP-binding protein; ORF_ID:all4546. | ORF_ID:alr0296; hypothetical protein. | 0.492 |
all4546 | alr0484 | gene:10496596 | gene:10492493 | ABC transporter ATP-binding protein; ORF_ID:all4546. | ORF_ID:alr0484; hypothetical protein. | 0.985 |
all4546 | alr4100 | gene:10496596 | gene:10496148 | ABC transporter ATP-binding protein; ORF_ID:all4546. | ORF_ID:alr4100; hypothetical protein. | 0.490 |
all4546 | alr4576 | gene:10496596 | gene:10496626 | ABC transporter ATP-binding protein; ORF_ID:all4546. | Biotin transporter; ORF_ID:alr4576; hypothetical protein. | 0.956 |
all4546 | cbiM | gene:10496596 | gene:10495985 | ABC transporter ATP-binding protein; ORF_ID:all4546. | Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | 0.551 |
all4546 | cbiM-2 | gene:10496596 | gene:10495989 | ABC transporter ATP-binding protein; ORF_ID:all4546. | Cobalt transport protein; ORF_ID:alr3947; cbiM gene product. | 0.551 |
alr0296 | all1547 | gene:10492304 | gene:10493560 | ORF_ID:alr0296; hypothetical protein. | ATP-binding protein of ABC transporter; ORF_ID:all1547. | 0.484 |
alr0296 | all4546 | gene:10492304 | gene:10496596 | ORF_ID:alr0296; hypothetical protein. | ABC transporter ATP-binding protein; ORF_ID:all4546. | 0.492 |
alr0296 | alr0484 | gene:10492304 | gene:10492493 | ORF_ID:alr0296; hypothetical protein. | ORF_ID:alr0484; hypothetical protein. | 0.755 |
alr0296 | alr4100 | gene:10492304 | gene:10496148 | ORF_ID:alr0296; hypothetical protein. | ORF_ID:alr4100; hypothetical protein. | 0.771 |
alr0484 | all1547 | gene:10492493 | gene:10493560 | ORF_ID:alr0484; hypothetical protein. | ATP-binding protein of ABC transporter; ORF_ID:all1547. | 0.977 |
alr0484 | all4546 | gene:10492493 | gene:10496596 | ORF_ID:alr0484; hypothetical protein. | ABC transporter ATP-binding protein; ORF_ID:all4546. | 0.985 |
alr0484 | alr0296 | gene:10492493 | gene:10492304 | ORF_ID:alr0484; hypothetical protein. | ORF_ID:alr0296; hypothetical protein. | 0.755 |
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