Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0729 | all4097 | gene:10492739 | gene:10496145 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all4097. | 0.983 |
all0729 | alr0709 | gene:10492739 | gene:10492719 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0709. | 0.721 |
all0729 | alr0710 | gene:10492739 | gene:10492720 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0710. | 0.950 |
all0729 | alr1121 | gene:10492739 | gene:10493135 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:alr1121. | 0.988 |
all0729 | alr2428 | gene:10492739 | gene:10494458 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:alr2428. | 0.989 |
all0729 | cyaC | gene:10492739 | gene:10497018 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Adenylate cyclase carring two-component hybrid sensor and regulator domains; ORF_ID:all4963. | 0.983 |
all4097 | all0729 | gene:10496145 | gene:10492739 | Two-component hybrid sensor and regulator; ORF_ID:all4097. | Two-component hybrid sensor and regulator; ORF_ID:all0729. | 0.983 |
all4097 | alr0709 | gene:10496145 | gene:10492719 | Two-component hybrid sensor and regulator; ORF_ID:all4097. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0709. | 0.857 |
all4097 | alr0710 | gene:10496145 | gene:10492720 | Two-component hybrid sensor and regulator; ORF_ID:all4097. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0710. | 0.867 |
all4097 | alr1121 | gene:10496145 | gene:10493135 | Two-component hybrid sensor and regulator; ORF_ID:all4097. | Two-component hybrid sensor and regulator; ORF_ID:alr1121. | 0.993 |
all4097 | alr2428 | gene:10496145 | gene:10494458 | Two-component hybrid sensor and regulator; ORF_ID:all4097. | Two-component hybrid sensor and regulator; ORF_ID:alr2428. | 0.991 |
all4097 | cyaC | gene:10496145 | gene:10497018 | Two-component hybrid sensor and regulator; ORF_ID:all4097. | Adenylate cyclase carring two-component hybrid sensor and regulator domains; ORF_ID:all4963. | 0.979 |
alr0091 | alr0249 | gene:10492095 | gene:10492257 | Na+/H+-exchanging protein; ORF_ID:alr0091. | Transposase; ORF_ID:alr0249. | 0.725 |
alr0091 | alr0709 | gene:10492095 | gene:10492719 | Na+/H+-exchanging protein; ORF_ID:alr0091. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0709. | 0.720 |
alr0091 | alr0710 | gene:10492095 | gene:10492720 | Na+/H+-exchanging protein; ORF_ID:alr0091. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0710. | 0.720 |
alr0091 | alr1199 | gene:10492095 | gene:10493213 | Na+/H+-exchanging protein; ORF_ID:alr0091. | ORF_ID:alr1199; hypothetical protein. | 0.729 |
alr0091 | alr1200 | gene:10492095 | gene:10493214 | Na+/H+-exchanging protein; ORF_ID:alr0091. | ORF_ID:alr1200; unknown protein. | 0.725 |
alr0249 | alr0091 | gene:10492257 | gene:10492095 | Transposase; ORF_ID:alr0249. | Na+/H+-exchanging protein; ORF_ID:alr0091. | 0.725 |
alr0249 | alr0709 | gene:10492257 | gene:10492719 | Transposase; ORF_ID:alr0249. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0709. | 0.720 |
alr0249 | alr0710 | gene:10492257 | gene:10492720 | Transposase; ORF_ID:alr0249. | Serine/threonine kinase with two-component sensor domain; ORF_ID:alr0710. | 0.720 |
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