Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0665 | all3220 | gene:10492676 | gene:10495258 | ORF_ID:all0665; unknown protein. | ORF_ID:all3220; hypothetical protein. | 0.521 |
all0665 | alr2418 | gene:10492676 | gene:10494448 | ORF_ID:all0665; unknown protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.493 |
all0665 | alr2800 | gene:10492676 | gene:10494834 | ORF_ID:all0665; unknown protein. | WD-repeat protein; ORF_ID:alr2800. | 0.449 |
all1466 | alr2418 | gene:10493480 | gene:10494448 | Kinesin light chain; ORF_ID:all1466. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.437 |
all1466 | alr2800 | gene:10493480 | gene:10494834 | Kinesin light chain; ORF_ID:all1466. | WD-repeat protein; ORF_ID:alr2800. | 0.407 |
all2799 | alr2800 | gene:10494833 | gene:10494834 | ORF_ID:all2799; hypothetical protein. | WD-repeat protein; ORF_ID:alr2800. | 0.411 |
all3220 | all0665 | gene:10495258 | gene:10492676 | ORF_ID:all3220; hypothetical protein. | ORF_ID:all0665; unknown protein. | 0.521 |
all3220 | alr2800 | gene:10495258 | gene:10494834 | ORF_ID:all3220; hypothetical protein. | WD-repeat protein; ORF_ID:alr2800. | 0.521 |
all4761 | alr2800 | gene:10496814 | gene:10494834 | ORF_ID:all4761; unknown protein. | WD-repeat protein; ORF_ID:alr2800. | 0.425 |
alr2418 | all0665 | gene:10494448 | gene:10492676 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | ORF_ID:all0665; unknown protein. | 0.493 |
alr2418 | all1466 | gene:10494448 | gene:10493480 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Kinesin light chain; ORF_ID:all1466. | 0.437 |
alr2418 | alr2800 | gene:10494448 | gene:10494834 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | WD-repeat protein; ORF_ID:alr2800. | 0.493 |
alr2800 | all0665 | gene:10494834 | gene:10492676 | WD-repeat protein; ORF_ID:alr2800. | ORF_ID:all0665; unknown protein. | 0.449 |
alr2800 | all1466 | gene:10494834 | gene:10493480 | WD-repeat protein; ORF_ID:alr2800. | Kinesin light chain; ORF_ID:all1466. | 0.407 |
alr2800 | all2799 | gene:10494834 | gene:10494833 | WD-repeat protein; ORF_ID:alr2800. | ORF_ID:all2799; hypothetical protein. | 0.411 |
alr2800 | all3220 | gene:10494834 | gene:10495258 | WD-repeat protein; ORF_ID:alr2800. | ORF_ID:all3220; hypothetical protein. | 0.521 |
alr2800 | all4761 | gene:10494834 | gene:10496814 | WD-repeat protein; ORF_ID:alr2800. | ORF_ID:all4761; unknown protein. | 0.425 |
alr2800 | alr2418 | gene:10494834 | gene:10494448 | WD-repeat protein; ORF_ID:alr2800. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.493 |