STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknASerine/threonine kinase; Probably required for both normal cellular growth and differentiation. Inactivation of pknA leads to colonies that appear light green and rough in the absence of combined nitrogen. (564 aa)    
Predicted Functional Partners:
all3226
ORF_ID:all3226; hypothetical protein.
 
  
 0.875
all5014
ORF_ID:all5014; hypothetical protein.
      
 0.852
alr4516
ORF_ID:alr4516; probable protein phosphatase.
  
   0.806
all1731
ORF_ID:all1731; hypothetical protein.
  
   0.803
alr0547
ORF_ID:alr0547; probable protein phosphatase.
  
   0.802
all2470
ORF_ID:all2470; hypothetical protein.
  
   0.787
alr2502
Serine/threonine kinase; ORF_ID:alr2502.
  
   
0.540
pknE
Protein serine-threonine kinase; ORF_ID:alr3732; pknE gene product.
  
   
0.476
all5016
ORF_ID:all5016; hypothetical protein.
 
 
    0.445
alr3494
ORF_ID:alr3494; hypothetical protein.
 
    0.439
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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