Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1731 | alr4949 | gene:10493749 | gene:10497004 | ORF_ID:all1731; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4949. | 0.760 |
all2470 | alr4949 | gene:10494501 | gene:10497004 | ORF_ID:all2470; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4949. | 0.737 |
all3226 | alr4949 | gene:10495264 | gene:10497004 | ORF_ID:all3226; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4949. | 0.640 |
all5016 | alr4949 | gene:10497074 | gene:10497004 | ORF_ID:all5016; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4949. | 0.752 |
alr0547 | alr4949 | gene:10492558 | gene:10497004 | ORF_ID:alr0547; probable protein phosphatase. | Serine/threonine kinase; ORF_ID:alr4949. | 0.769 |
alr3494 | alr3495 | gene:10495533 | gene:10495534 | ORF_ID:alr3494; hypothetical protein. | ORF_ID:alr3495; hypothetical protein. | 0.537 |
alr3494 | alr4949 | gene:10495533 | gene:10497004 | ORF_ID:alr3494; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4949. | 0.750 |
alr3495 | alr3494 | gene:10495534 | gene:10495533 | ORF_ID:alr3495; hypothetical protein. | ORF_ID:alr3494; hypothetical protein. | 0.537 |
alr3495 | alr4949 | gene:10495534 | gene:10497004 | ORF_ID:alr3495; hypothetical protein. | Serine/threonine kinase; ORF_ID:alr4949. | 0.617 |
alr4516 | alr4949 | gene:10496565 | gene:10497004 | ORF_ID:alr4516; probable protein phosphatase. | Serine/threonine kinase; ORF_ID:alr4949. | 0.773 |
alr4949 | all1731 | gene:10497004 | gene:10493749 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:all1731; hypothetical protein. | 0.760 |
alr4949 | all2470 | gene:10497004 | gene:10494501 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:all2470; hypothetical protein. | 0.737 |
alr4949 | all3226 | gene:10497004 | gene:10495264 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:all3226; hypothetical protein. | 0.640 |
alr4949 | all5016 | gene:10497004 | gene:10497074 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:all5016; hypothetical protein. | 0.752 |
alr4949 | alr0547 | gene:10497004 | gene:10492558 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:alr0547; probable protein phosphatase. | 0.769 |
alr4949 | alr3494 | gene:10497004 | gene:10495533 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:alr3494; hypothetical protein. | 0.750 |
alr4949 | alr3495 | gene:10497004 | gene:10495534 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:alr3495; hypothetical protein. | 0.617 |
alr4949 | alr4516 | gene:10497004 | gene:10496565 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:alr4516; probable protein phosphatase. | 0.773 |
alr4949 | alr5360 | gene:10497004 | gene:10497422 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:alr5360; hypothetical protein. | 0.675 |
alr4949 | asl4948 | gene:10497004 | gene:10497003 | Serine/threonine kinase; ORF_ID:alr4949. | ORF_ID:asl4948; unknown protein. | 0.543 |
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