Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| all1140 | asr3935 | gene:10493154 | gene:10495977 | ORF_ID:all1140; similar to N-acetylmuramoyl-L-alanine amidase. | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 0.681 |
| alr0693 | asr0689 | gene:10492703 | gene:10492699 | ORF_ID:alr0693; unknown protein. | ORF_ID:asr0689; unknown protein. | 0.940 |
| alr0693 | asr3935 | gene:10492703 | gene:10495977 | ORF_ID:alr0693; unknown protein. | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 0.657 |
| alr0693 | hupL | gene:10492703 | gene:10492687 | ORF_ID:alr0693; unknown protein. | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | 0.831 |
| asr0689 | alr0693 | gene:10492699 | gene:10492703 | ORF_ID:asr0689; unknown protein. | ORF_ID:alr0693; unknown protein. | 0.940 |
| asr0689 | asr3935 | gene:10492699 | gene:10495977 | ORF_ID:asr0689; unknown protein. | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 0.655 |
| asr0689 | hupL | gene:10492699 | gene:10492687 | ORF_ID:asr0689; unknown protein. | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | 0.508 |
| asr3935 | all1140 | gene:10495977 | gene:10493154 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | ORF_ID:all1140; similar to N-acetylmuramoyl-L-alanine amidase. | 0.681 |
| asr3935 | alr0693 | gene:10495977 | gene:10492703 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | ORF_ID:alr0693; unknown protein. | 0.657 |
| asr3935 | asr0689 | gene:10495977 | gene:10492699 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | ORF_ID:asr0689; unknown protein. | 0.655 |
| asr3935 | hisC-2 | gene:10495977 | gene:10495978 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | Histidinol-phosphate aminotransferase; ORF_ID:alr3936. | 0.621 |
| asr3935 | hlpA | gene:10495977 | gene:10496478 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | HlpA protein; ORF_ID:all4429; similar to hemolytic protein HlpA. | 0.604 |
| asr3935 | hoxH | gene:10495977 | gene:10492777 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. | 0.708 |
| asr3935 | hupL | gene:10495977 | gene:10492687 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | [NiFe] uptake hydrogenase large subunit; ORF_ID:all0687; hupL gene product. | 0.912 |
| asr3935 | rpl19 | gene:10495977 | gene:10497357 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.636 |
| asr3935 | rps15 | gene:10495977 | gene:10492760 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.699 |
| asr3935 | rps20 | gene:10495977 | gene:10493608 | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.794 |
| hisC-2 | asr3935 | gene:10495978 | gene:10495977 | Histidinol-phosphate aminotransferase; ORF_ID:alr3936. | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 0.621 |
| hlpA | asr3935 | gene:10496478 | gene:10495977 | HlpA protein; ORF_ID:all4429; similar to hemolytic protein HlpA. | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 0.604 |
| hoxH | asr3935 | gene:10492777 | gene:10495977 | Hydrogenase large subunit; ORF_ID:alr0766; hoxH gene product. | DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family. | 0.708 |
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