STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all4284Lignostilbene-alpha,beta-dioxygenase; ORF_ID:all4284. (497 aa)    
Predicted Functional Partners:
all4283
ORF_ID:all4283; hypothetical protein.
       0.701
alr3672
Aldehyde dehydrogenase; ORF_ID:alr3672; Belongs to the aldehyde dehydrogenase family.
      
 0.681
alr3771
Aldehyde dehydrogenase; ORF_ID:alr3771; Belongs to the aldehyde dehydrogenase family.
      
 0.681
all5022
Aldehyde dehydrogenase; ORF_ID:all5022; Belongs to the aldehyde dehydrogenase family.
      
 0.681
crtQ
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' (By similarity).
      
 0.659
pds
Phytoene desaturase; ORF_ID:alr1832; pds gene product.
  
   
 0.573
alr3165
Bacteriorhodopsin; ORF_ID:alr3165.
  
   
 0.540
all4285
ORF_ID:all4285; hypothetical protein.
       0.516
clpP-3
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
      
 0.454
alr3887
Argininosuccinate lyase; ORF_ID:alr3887.
 
      0.450
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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