STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr5237ORF_ID:alr5237; probable glycosyl transferase. (417 aa)    
Predicted Functional Partners:
alr5236
ORF_ID:alr5236; unknown protein.
 
     0.949
alr5235
ORF_ID:alr5235; probable glycosyl transferase.
 
     0.947
alr5238
Glycosyltransferase; ORF_ID:alr5238.
 
    
0.837
all1345
ORF_ID:all1345; probable glycosyl transferase.
  
     0.684
alr5234
ORF_ID:alr5234; hypothetical protein.
       0.664
alr5239
ORF_ID:alr5239; hypothetical protein.
 
    
0.651
alr5223
Glycosyltransferase; ORF_ID:alr5223.
  
     0.604
alr5233
ORF_ID:alr5233; hypothetical protein.
 
     0.573
all0824
Two-component hybrid sensor and regulator; ORF_ID:all0824.
  
     0.521
alr1575
ORF_ID:alr1575; unknown protein.
  
     0.458
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.