STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGB2High mobility group protein B2. (197 aa)    
Predicted Functional Partners:
TLR4
Toll-like receptor 4 isoform X1.
   
 0.647
ACTR8
Actin-related protein 8.
    
 0.637
TP53
Cellular tumor antigen p53.
   
 
 0.633
POLRMT
DNA-directed RNA polymerase, mitochondrial isoform X1.
    
 0.629
GTF2H1
Transcription initiation factor TFIIH subunit 1.
    
 0.605
ERCC3
LOW QUALITY PROTEIN: TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.590
LY96
Lymphocyte antigen 96.
   
 0.586
RUVBL1
RuvB-like protein 1 (pontin 52).
    
 0.575
ACTR5
Actin-related protein 5.
    
 0.568
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
   
 0.555
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.