STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000002641annotation not available (127 aa)    
Predicted Functional Partners:
TRIM33
E3 ubiquitin-protein ligase TRIM33.
 
      0.899
SMARCAD1
annotation not available
   
 
 0.664
ENSPVIP00000031951
annotation not available
   
 0.643
SMAD4
Mothers against decapentaplegic homolog 4 isoform X1.
   
 0.643
SMAD2
SMAD family member 2.
    
 0.624
SMAD3
SMAD family member 3.
    
 0.624
CBX3
Chromobox protein homolog 3 isoform X1.
    
 0.607
CDC27
Cell division cycle protein 27 homolog isoform X1.
   
  0.579
FZR1
Cell division cycle 20-like protein 1, cofactor of APC complex.
   
  0.577
CCNA2
Cyclin-A2.
   
   0.573
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.