STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMND5AE3 ubiquitin-protein transferase RMND5. (476 aa)    
Predicted Functional Partners:
WDR26
WD repeat-containing protein 26.
  
 0.981
GID8
Glucose-induced degradation protein 8 homolog.
    
 0.975
ARMC8
Armadillo repeat-containing protein 8 isoform X1.
    
 0.972
MAEA
Macrophage erythroblast attacher isoform X1.
    
0.938
GID4
Glucose-induced degradation protein 4 homolog.
    
 0.937
RANBP9
Ran-binding protein 9/10.
  
 0.880
ENSPVIP00000015311
annotation not available
   
 0.855
RMND5B
E3 ubiquitin-protein transferase RMND5.
  
 
0.826
RANBP10
Ran-binding protein 9/10.
  
 0.784
YPEL5
Protein yippee-like 5.
    
 0.777
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.