STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX4Sorting nexin-4. (402 aa)    
Predicted Functional Partners:
SNX30
Sorting nexin-7/30.
   
 
 0.954
SNX7
Sorting nexin-7/30.
   
 
 0.941
SNX2
Sorting nexin-2 isoform X1.
   
 
 0.936
SNX1
Sorting nexin-1/2.
   
 
 0.933
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 
 0.773
LOC110070886
Vacuolar protein sorting-associated protein 29-like.
    
 
 0.753
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
    
 
 0.753
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.744
SERPINE2
Glia-derived nexin.
      
 0.703
SNX9
Sorting nexin-9 isoform X1.
   
 0.688
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.