STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX59Probable ATP-dependent RNA helicase DDX59. (619 aa)    
Predicted Functional Partners:
PES1
Pescadillo homolog.
   
 0.800
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.759
NOP58
Nucleolar protein 58 isoform X1.
  
 0.732
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 0.726
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
 0.719
WDR12
Ribosome biogenesis protein WDR12.
   
 0.703
MTREX
Superkiller viralicidic activity 2-like 2.
   
 0.694
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.688
NSA2
Ribosome biogenesis protein NSA2 homolog.
   
 0.681
GNL2
Nucleolar GTP-binding protein 2.
  
 0.673
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.