STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB2Calcium and integrin-binding family member 2 isoform X1. (187 aa)    
Predicted Functional Partners:
TMC2
Transmembrane channel-like protein 2 isoform X1.
    
 0.961
TMC1
Transmembrane channel like 1.
    
 0.856
TMC3
Transmembrane channel like 3.
    
 0.856
USH2A
LOW QUALITY PROTEIN: usherin.
    
 0.712
USH1G
Usher syndrome type-1G protein.
    
 0.707
USH1C
Harmonin isoform X1.
    
 
 0.696
WHRN
Whirlin.
    
 
 0.696
PDZD7
PDZ domain-containing protein 7 isoform X1.
    
 
 0.681
LHFPL4
Lipoma HMGIC fusion partner-like protein 4.
     
 0.665
LHFPL4-2
Lipoma HMGIC fusion partner-like 4 protein.
     
 0.665
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.