STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716755_03451Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_000716755_03453
Unannotated protein.
  
   
 0.619
GCA_000716755_03450
Unannotated protein.
       0.607
GCA_000716755_08468
Unannotated protein.
  
     0.596
GCA_000716755_06550
Unannotated protein.
  
     0.585
GCA_000716755_06655
Unannotated protein.
  
     0.571
GCA_000716755_06365
Unannotated protein.
  
     0.554
GCA_000716755_07876
Unannotated protein.
  
     0.551
GCA_000716755_00290
Unannotated protein.
  
     0.547
GCA_000716755_02223
Unannotated protein.
  
     0.544
GCA_000716755_02615
Unannotated protein.
  
     0.539
Your Current Organism:
Saccharothrix syringae
NCBI taxonomy Id: 103733
Other names: ATCC 51364, DSM 43886, IFO 14523, INA 2240, JCM 6844, NBRC 14523, NRRL B-16468, Nocardiopsis syringae, S. syringae
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.