STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK25570.1Outer membrane lipoprotein-sorting protein. (211 aa)    
Predicted Functional Partners:
SEK75754.1
Protein of unknown function.
  
 
 
 0.806
SEK25534.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
  
 0.753
SEK25610.1
Lipopolysaccharide export system permease protein.
 
     0.749
SEK76343.1
Protein involved in gliding motility SprE.
  
     0.734
SEM18478.1
Long-chain fatty acid transport protein.
  
     0.730
SEL11196.1
Cell division protein FtsQ.
  
     0.728
SEL06152.1
Surface antigen.
  
     0.727
SEL65687.1
Protein involved in gliding motility GldM.
  
     0.725
SEK29035.1
Family of unknown function.
  
     0.715
SEL18489.1
Hypothetical protein.
  
     0.708
Your Current Organism:
Aquimarina amphilecti
NCBI taxonomy Id: 1038014
Other names: A. amphilecti, Aquimarina amphilecti Kennedy et al. 2014, Aquimarina sp. 92V, DSM 25232, NCIMB 14723, strain 92V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.