STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQS_07090Cytoplasmic alpha-amylase; COG0366 Glycosidases. (457 aa)    
Predicted Functional Partners:
GQS_06205
Cyclomaltodextrinase; COG0366 Glycosidases.
  
  
 0.946
GQS_06735
4-alpha-Glucanotransferase; COG1449 Alpha-amylase/alpha-mannosidase.
     
 0.919
GQS_03805
COG0058 Glucan phosphorylase.
     
  0.900
GQS_04430
Alpha-amylase; Belongs to the glycosyl hydrolase 57 family.
     
  0.900
GQS_07085
COG0640 Predicted transcriptional regulators.
       0.511
GQS_07080
COG1888 Uncharacterized protein conserved in archaea.
       0.477
GQS_07075
COG0640 Predicted transcriptional regulators.
       0.437
GQS_08270
Cyclomaltodextrin glucanotransferase; COG0366 Glycosidases.
 
   
 0.436
Your Current Organism:
Thermococcus sp. 4557
NCBI taxonomy Id: 1042877
Other names: T. sp. 4557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.