STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_08566HIV Tat-specific factor 1-like protein. (260 aa)    
Predicted Functional Partners:
EAG_08564
HIV Tat-specific factor 1-like protein.
 
     0.918
EAG_11541
Splicing factor 3B subunit 1.
    
 
 0.905
EAG_14657
Protein crooked neck.
   
 
 0.829
EAG_15130
Probable ATP-dependent RNA helicase DDX46.
   
 0.828
EAG_03768
Splicing factor 3A subunit 2.
   
 
 0.767
EAG_10876
Splicing factor 3B subunit 2.
   
 
 0.754
EAG_12501
Probable U2 small nuclear ribonucleoprotein A.
    
 
 0.716
EAG_09442
CS domain-containing protein.
   
 0.703
EAG_10816
Splicing factor 1.
     
 0.643
EAG_15486
Splicing factor 3 subunit 1.
    
 
 0.636
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.