STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_01102Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (331 aa)    
Predicted Functional Partners:
EAG_07665
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.999
EAG_02738
Geranylgeranyl transferase type-1 subunit beta.
    
 0.997
EAG_09220
CAAX prenyl protease 2.
     
 0.984
EAG_07868
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.967
EAG_02073
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.960
EAG_15110
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.957
EAG_04960
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
     
 0.936
EAG_13096
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
     
 0.931
EAG_01505
Nogo-B receptor.
     
 0.929
EAG_12405
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.693
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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