EAG_13388 protein (Camponotus floridanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAG_13388

Protein FAM32A. (114 aa)

Predicted Functional Partners:

EAG_14921

0.968

EAG_10311

0.933

EAG_08953

0.920

EAG_03476

0.892

EAG_08766

0.886

EAG_13980

0.866

EAG_10819

0.763

EAG_13636

0.719

EAG_04948

0.702

EAG_14341

0.701

Your Current Organism:

Camponotus floridanus

NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAG_03476	EAG_04948	E2ACA9	E2AME2	Pre-mRNA-processing factor 17.	Coiled-coil domain-containing protein 12.	0.998
EAG_03476	EAG_08766	E2ACA9	E2B1T3	Pre-mRNA-processing factor 17.	NF-kappa-B-activating protein.	0.858
EAG_03476	EAG_08953	E2ACA9	E2AUL2	Pre-mRNA-processing factor 17.	Pre-mRNA-splicing factor Syf2.	0.999
EAG_03476	EAG_10311	E2ACA9	E2AM03	Pre-mRNA-processing factor 17.	PRKR-interacting protein 1-like protein.	0.932
EAG_03476	EAG_10819	E2ACA9	E2AYT0	Pre-mRNA-processing factor 17.	Coiled-coil domain-containing protein 94.	0.997
EAG_03476	EAG_13388	E2ACA9	E2AC69	Pre-mRNA-processing factor 17.	Protein FAM32A.	0.892
EAG_03476	EAG_13636	E2ACA9	E2AK76	Pre-mRNA-processing factor 17.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.946
EAG_03476	EAG_13980	E2ACA9	E2A3G4	Pre-mRNA-processing factor 17.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.997
EAG_03476	EAG_14341	E2ACA9	E2AZW2	Pre-mRNA-processing factor 17.	Protein FAM50-like protein.	0.788
EAG_03476	EAG_14921	E2ACA9	E2AML0	Pre-mRNA-processing factor 17.	Pre-mRNA-splicing factor Slu7.	0.998
EAG_04948	EAG_03476	E2AME2	E2ACA9	Coiled-coil domain-containing protein 12.	Pre-mRNA-processing factor 17.	0.998
EAG_04948	EAG_08953	E2AME2	E2AUL2	Coiled-coil domain-containing protein 12.	Pre-mRNA-splicing factor Syf2.	0.945
EAG_04948	EAG_10311	E2AME2	E2AM03	Coiled-coil domain-containing protein 12.	PRKR-interacting protein 1-like protein.	0.745
EAG_04948	EAG_10819	E2AME2	E2AYT0	Coiled-coil domain-containing protein 12.	Coiled-coil domain-containing protein 94.	0.777
EAG_04948	EAG_13388	E2AME2	E2AC69	Coiled-coil domain-containing protein 12.	Protein FAM32A.	0.702
EAG_04948	EAG_13636	E2AME2	E2AK76	Coiled-coil domain-containing protein 12.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.942
EAG_04948	EAG_13980	E2AME2	E2A3G4	Coiled-coil domain-containing protein 12.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.938
EAG_08766	EAG_03476	E2B1T3	E2ACA9	NF-kappa-B-activating protein.	Pre-mRNA-processing factor 17.	0.858
EAG_08766	EAG_08953	E2B1T3	E2AUL2	NF-kappa-B-activating protein.	Pre-mRNA-splicing factor Syf2.	0.827
EAG_08766	EAG_10311	E2B1T3	E2AM03	NF-kappa-B-activating protein.	PRKR-interacting protein 1-like protein.	0.868