STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_00523E3 ubiquitin-protein ligase LRSAM1. (222 aa)    
Predicted Functional Partners:
EAG_00797
E3 ubiquitin-protein ligase LRSAM1.
 
      0.900
EAG_14632
Serine/threonine-protein kinase MST4.
   
 
 0.832
EAG_02689
Protein Mo25.
    
 
 0.615
EAG_03247
Calcium homeostasis endoplasmic reticulum protein.
    
 0.615
EAG_15031
Tumor susceptibility gene 101 protein.
    
 
 0.583
EAG_15869
Platelet glycoprotein V.
  
  
  0.536
EAG_05190
Leucine-rich repeat-containing protein 59.
  
     0.533
EAG_11358
Peptidylprolyl isomerase-like 5.
  
     0.531
EAG_08449
CCR4-NOT transcription complex subunit 6.
  
     0.529
EAG_14408
Phospholipase A2 inhibitor subunit B.
  
     0.528
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.