STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_00611Lysine-specific histone demethylase 1. (508 aa)    
Predicted Functional Partners:
EAG_08047
REST corepressor.
    
 0.950
EAG_14327
Lysine-specific histone demethylase 1.
 
     0.939
EAG_10864
UPF0551 protein C8orf38-like protein.
   
 
 0.800
EAG_14624
Protein-serine/threonine kinase.
   
  
 0.795
EAG_04647
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.758
EAG_09858
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.752
EAG_06173
Chromodomain-helicase-DNA-binding protein Mi-2-like protein.
   
 0.741
EAG_09814
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.738
EAG_05736
PHD finger protein 21A.
    
 0.662
EAG_08970
High mobility group protein 20A.
   
 0.659
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.