STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_02352Probable ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (414 aa)    
Predicted Functional Partners:
EAG_11997
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.771
EAG_07236
Guanine nucleotide-binding protein-like 3-like protein.
  
 0.718
EAG_08514
Superkiller viralicidic activity 2-like 2.
   
 0.711
EAG_04350
Nucleolar protein 5.
  
 
 0.696
EAG_12410
Probable rRNA-processing protein EBP2-like protein.
   
 0.680
EAG_14788
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.676
EAG_11541
Splicing factor 3B subunit 1.
   
 0.668
EAG_02426
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.668
EAG_10114
H/ACA ribonucleoprotein complex subunit 4.
  
 
 0.663
EAG_10345
THO complex subunit 4.
    
 0.658
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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