STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_01142Aprataxin and PNK-like factor. (413 aa)    
Predicted Functional Partners:
EAG_14269
ATP-dependent DNA helicase 2 subunit 1.
    
 
 0.925
EAG_03509
DNA-repair protein XRCC1.
    
 
 0.882
EAG_09408
ATP-dependent DNA helicase 2 subunit 2.
    
 
 0.838
EAG_09409
Uncharacterized protein.
    
 
 0.838
EAG_05598
DNA ligase 4; Belongs to the ATP-dependent DNA ligase family.
    
 
 0.712
EAG_15245
Aprataxin.
      
 0.693
EAG_06367
Poly [ADP-ribose] polymerase.
    
 
 0.667
EAG_07221
DNA ligase.
    
 
 0.656
EAG_09486
Probable tyrosyl-DNA phosphodiesterase.
    
 
 0.619
EAG_05725
Cytochrome b5 reductase 4.
      
 0.593
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.