STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAG_10735Pre-rRNA-processing protein TSR2-like protein. (160 aa)    
Predicted Functional Partners:
EAG_09592
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.985
EAG_02816
Metallophosphoesterase 1.
   
  
 0.904
EAG_13964
DNA-directed RNA polymerase I subunit RPA43.
   
    0.890
EAG_02904
U3 small nucleolar ribonucleoprotein protein IMP4.
   
    0.870
EAG_12694
Probable ribosome biogenesis protein RLP24.
   
  
 0.868
EAG_09326
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.862
EAG_09665
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
  
 0.848
EAG_07732
Pre-rRNA-processing protein TSR1-like protein.
   
 
 0.818
EAG_04735
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.817
EAG_16083
Ribosomal RNA processing protein 1-like protein.
   
  
 0.786
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.