STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_06117Roc2. (59 aa)    
Predicted Functional Partners:
OBRU01_14429
Cullin; Belongs to the cullin family.
    
 0.994
OBRU01_23769
S-phase kinase-associated protein; Belongs to the SKP1 family.
   
 0.988
OBRU01_18842
Elongin b.
   
 0.979
OBRU01_24426
Cullin-4B; Belongs to the cullin family.
    
 0.970
OBRU01_00293
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.969
OBRU01_18362
Putative NEDD8.
   
 0.967
OBRU01_09678
Putative Cullin-associated NEDD8-dissociated protein 1.
    
 0.941
OBRU01_19863
Von Hippel-Lindau disease tumor suppressor.
    
 0.932
OBRU01_06429
Putative cop9 complex subunit.
   
 0.932
OBRU01_10244
Putative DNA repair protein xp-e.
    
 0.927
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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