Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DSC_00195 | DSC_00505 | DSC_00195 | DSC_00505 | COG3803 Uncharacterized protein conserved in bacteria. | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | 0.425 |
DSC_00500 | DSC_00505 | DSC_00500 | DSC_00505 | Hypothetical protein. | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | 0.545 |
DSC_00500 | DSC_00510 | DSC_00500 | DSC_00510 | Hypothetical protein. | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.422 |
DSC_00500 | DSC_00515 | DSC_00500 | DSC_00515 | Hypothetical protein. | Hypothetical protein. | 0.422 |
DSC_00505 | DSC_00195 | DSC_00505 | DSC_00195 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | COG3803 Uncharacterized protein conserved in bacteria. | 0.425 |
DSC_00505 | DSC_00500 | DSC_00505 | DSC_00500 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | Hypothetical protein. | 0.545 |
DSC_00505 | DSC_00510 | DSC_00505 | DSC_00510 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.582 |
DSC_00505 | DSC_00515 | DSC_00505 | DSC_00515 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | Hypothetical protein. | 0.581 |
DSC_00505 | DSC_01500 | DSC_00505 | DSC_01500 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | COG0625 Glutathione S-transferase. | 0.455 |
DSC_00505 | DSC_09665 | DSC_00505 | DSC_09665 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | COG0625 Glutathione S-transferase. | 0.488 |
DSC_00505 | rpoA | DSC_00505 | DSC_12705 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.618 |
DSC_00505 | rpoB | DSC_00505 | DSC_12860 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.468 |
DSC_00505 | rpoC | DSC_00505 | DSC_12855 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.567 |
DSC_00505 | rpoZ | DSC_00505 | DSC_13460 | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.457 |
DSC_00510 | DSC_00500 | DSC_00510 | DSC_00500 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Hypothetical protein. | 0.422 |
DSC_00510 | DSC_00505 | DSC_00510 | DSC_00505 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | 0.582 |
DSC_00510 | DSC_00515 | DSC_00510 | DSC_00515 | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Hypothetical protein. | 0.773 |
DSC_00515 | DSC_00500 | DSC_00515 | DSC_00500 | Hypothetical protein. | Hypothetical protein. | 0.422 |
DSC_00515 | DSC_00505 | DSC_00515 | DSC_00505 | Hypothetical protein. | COG0625 Glutathione S-transferase; Belongs to the GST superfamily. | 0.581 |
DSC_00515 | DSC_00510 | DSC_00515 | DSC_00510 | Hypothetical protein. | COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.773 |
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