STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403055_01666Unannotated protein. (421 aa)    
Predicted Functional Partners:
GCA_000403055_00456
Unannotated protein.
 
 
 0.941
GCA_000403055_00455
Unannotated protein.
 
  
 0.929
GCA_000403055_00461
Unannotated protein.
 
  
 0.814
GCA_000403055_00460
Unannotated protein.
 
   
 0.807
GCA_000403055_00457
Unannotated protein.
 
   
 0.793
GCA_000403055_01667
Unannotated protein.
       0.781
GCA_000403055_01665
Unannotated protein.
     
 0.777
GCA_000403055_00458
Unannotated protein.
 
  
 0.759
GCA_000403055_00180
Unannotated protein.
 
   
 0.714
GCA_000403055_00771
Unannotated protein.
 
 
 0.697
Your Current Organism:
Cloacimonetes bacterium SCGC AAA252N14
NCBI taxonomy Id: 1046965
Other names: C. bacterium SCGC AAA252-N14, Cloacimonetes bacterium SCGC AAA252-N14, candidate division KSB1 bacterium SCGC AAA252-N14
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.