STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402595_01283Unannotated protein. (728 aa)    
Predicted Functional Partners:
GCA_000402595_01282
Unannotated protein.
     0.994
GCA_000402595_00526
Unannotated protein.
  
 
 0.845
GCA_000402595_02335
Unannotated protein.
  
  0.703
GCA_000402595_00729
Unannotated protein.
  
  0.692
GCA_000402595_00521
Unannotated protein.
  
 0.667
GCA_000402595_00281
Unannotated protein.
    
 
 0.654
GCA_000402595_02550
Unannotated protein.
  
 
 0.636
GCA_000402595_00756
Unannotated protein.
   
  0.614
GCA_000402595_01475
Unannotated protein.
    
  0.614
GCA_000402595_01284
Unannotated protein.
       0.603
Your Current Organism:
Aminicenantes bacterium SCGC AAA252A02
NCBI taxonomy Id: 1047013
Other names: A. bacterium SCGC AAA252-A02, Aminicenantes bacterium SCGC AAA252-A02, candidate division OP8 bacterium SCGC AAA252-A02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.