STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000405265_01674Unannotated protein. (441 aa)    
Predicted Functional Partners:
GCA_000405265_00433
Unannotated protein.
 
 
 0.794
GCA_000405265_01672
Unannotated protein.
       0.773
GCA_000405265_01673
Unannotated protein.
       0.773
GCA_000405265_00198
Unannotated protein.
 
 
 0.744
GCA_000405265_01669
Unannotated protein.
  
 
 0.743
GCA_000405265_01671
Unannotated protein.
       0.741
GCA_000405265_00318
Unannotated protein.
  
  
 0.709
GCA_000405265_00232
Unannotated protein.
  
 
 0.707
GCA_000405265_00552
Unannotated protein.
  
  
 0.702
GCA_000405265_00256
Unannotated protein.
  
  
 0.699
Your Current Organism:
Marinimicrobia bacterium JGI 0000039D08
NCBI taxonomy Id: 1047055
Other names: M. bacterium JGI 0000039-D08, Marinimicrobia bacterium JGI 0000039-D08, SAR406 cluster bacterium JGI 0000039-D08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.