STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_2010Sensor protein DegS. (377 aa)    
Predicted Functional Partners:
F3D3_2011
Transcriptional regulator DegU, LuxR family.
 0.994
F3D3_0878
DNA-binding response regulator; LuxR family.
 0.980
F3D3_0662
Sensory box/GGDEF family protein.
 
 0.955
F3D3_4072
Sensory box histidine kinase/response regulator.
  
 0.937
F3D3_3769
DNA-binding response regulator.
 
 0.927
F3D3_4640
Response regulator.
 
 0.913
F3D3_4594
Chemotaxis protein methyltransferase CheR.
  
 0.912
F3D3_3396
Hypothetical protein.
  
 0.897
F3D3_4652
Adenylate cyclase.
 
 0.870
F3D3_0912
Multi-sensor hybrid histidine kinase.
  
 0.837
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.